10
20
30 40
|
|
| |
Bostaurus
---------------MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQ
chicken
--------------MAPNIRKSHPLLKMINNSLIDLPAPSNISAWWNFGSLLAVCLMTQ
Sacchcere
----------------MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQ
Rbsphaer
MSGIPHDHYEPRTGIEKWLHSRLPIVALAYDTIM-IPTPRNLNWMWIWGVVLAFCLVLQ
Rbcapsul
MSGIPHDHYEPKTGIEKWLHDRLPIVGLVYDTIM-IPTPKNLNWWWIWGIVLAFTLVLQ
:
:.:
: : . :: * * .:. * * :*.. *: *
Prim.cons.
------------------------P22KLVN2TIID2P2PSNINWWWN2GSLLAFCLVLQ
50
60
70 80
90 100
| |
|
|
| |
Bostaurus
ILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYY
chicken
ILTGLLLAMHYTADTSLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIFLHIGRGLYY
Sacchcere
IVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYY
Rbsphaer
IVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYY
Rbcapsul
IVTGIVLAMHYTPHVDLAFASVEHIMRDVNGGWAMRYIHANGASLFFLAVYIHIFRGLYY
*:**:.:****:.. **:** *
*:*: *: :* :******:**: :::*: :****
Prim.cons.
IVTGI2LAMHYT222DLAFSSVEHIMRDVN2GWI2RYLHANGAS2FFI2VY2HI2RGLYY
110 120
130 140
150 160
|
|
|
|
| |
Bostaurus
GSYT--FLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVE
chicken
GSYL--YKETWNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVE
Sacchcere
GSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVS
Rbsphaer
GSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQT
Rbcapsul
GSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQA
*** . * *:::
: :.***:** :****.*******.*:.*** :* :
Prim.cons.
GSYKAPR23TWNVGVII2L2MMATAFMGYVLPWGQMSFWGATVITNLFSAIP2IGHSIVE
170 180
190 200
210
|
|
|
|
| |
Bostaurus
WIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISS--------D
chicken
WAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHESGSNNPLGISS--------D
Sacchcere
WLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITG--------N
Rbsphaer
WLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQ
Rbcapsul
WLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHTTGNNNPTGVEVRRTSKADAE
* ** :*.:.*: ***::*:::** * .:.
:*: :* *..**
*: :
Prim.cons.
WLWGGFSVDNATL2RFFALHYLLPF2IAA2V2IHLWALHETGSNNPTGI22RRTSKA2AD
220 230
240 250
260 270
|
|
| |
| |
Bostaurus
VDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYF
chicken
SDKIPFHPYYSFKDILGLTLMLTPFLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYF
Sacchcere
LDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLGQPDNYIPGNPLVTPASIDPEWYL
Rbsphaer
KDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYF
Rbcapsul
KDTLPFWPYFVIKDLFALALVLLGFFAVVAYMPNYLGHPDNYVQANPLSTPAHIVPEWYF
* :*: .*: :**:. :.: : .. : *:
**.*:*: .*** **. * ****:
Prim.cons.
KD2IPFHPYFIIKD222LALVLL5FF2LVLF2PN2LG2PDNY2PANPL2TPAHI2PEWYF
280
290 300
310
|
|
| |
Bostaurus
LFAYAILRS------------------IPNKLGGVLALAFSILILALIPLLHTSKQRSMM
chicken
LFAYAILRS------------------IPNKLGGVLALAASVLILFLIPFLHKSKQRTMT
Sacchcere
LPFYAILRS------------------IPDKLLGVITMFAAILVLLVLPFTDRSVVRGNT
Rbsphaer
LPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGR
Rbcapsul
LPFYAILRAFAADVWVVILVDGLTFGIVDAKFFGVIAMFGAIAVMALAPWLDTSKVRSGA
*
*****:
: *: **::: :: :: : * . * *
Prim.cons.
LPFYAILRSF2ADVWVV2222222FGIIP2KL2GVLAMF2AILVLALIP2LDTSKVRS2T
320 330
340 350
360 370
|
|
| |
| |
Bostaurus
FRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTAGTIENKL
chicken
FRPLSQTLFWLLVANLLILTWIGSQPVEHPFIIIGQMASLSYFTILLILFPTIGTLENKM
Sacchcere
FKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYFAYFLIIVPVISTIENVL
Rbsphaer
YRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPV
Rbcapsul
YRPKFRMWFWFLVLDFVVLTWVGAMPTEYPYDWISLIASTYWFAYFLVILPLLGATEKPE
:: : *: :. ::: * :*. . *: :. :*:
:* :*::.* .: *:
Prim.cons.
FRPLS25LFWLLVADFVILTWIGAQPVEHPY2WIGQIAS5YYFAYFLVILPT2GTIEN2L
380 390
400 410
|
|
| |
Bostaurus
LKW------------------------
chicken
LNY------------------------
Sacchcere
FYIGRVNK-------------------
Rbsphaer
APPATIEEDFNAHYSPATGGTKTVVAE
Rbcapsul
PIPASIEEDFNSHYGNPAE--------
Prim.cons. L5PA3IEEDFN2HY22222GTKTVVAE
-----------------------------------------------
Vertical
alignment with all sequences numbered,
for
finding corresponding residue numbers in
different
species:
1 -- -- -- M1 M1
2 -- -- -- S2 S2
3 -- -- -- G3 G3
4 -- -- -- I4 I4
5 -- -- -- P5 P5
6 -- -- -- H6 H6
7 -- -- -- D7 D7
8 -- -- -- H8 H8
9 -- -- -- Y9 Y9
10 --
-- -- E10 E10
11
-- -- -- P11 P11
12 --
-- -- R12 K12
13 --
-- -- T13 T13
14 --
-- -- G14 G14
15 --
M1 -- I15 I15
16 M1
A2 -- E16 E16
17 T2
P3 M1 K17 K17
18 N3
N4 A2 W18 W18
19 I4
I5 F3 L19 L19
20 R5
R6 R4 H20 H20
21 K6
K7 K5 S21 D21
22 S7
S8 S6 R22 R22
23 H8
H9 N7 L23 L23
24 P9
P10 V8 P24 P24
25 L10
L11 Y9 I25 I25
26 M11
L12 L10 V26 V26
27 K12
K13 S11 A27 G27
28 I13
M14 L12 L28 L28
29 V14
I15 V13 A29 V29
30 N15
N16 N14 Y30 Y30
31 N16
N17 S15 D31 D31
32 A17
S18 Y16 T32 T32
33 F18
L19 I17 I33 I33
34 I19
I20 I18 M34 M34
35 D20
D21 D19 -- --
36 L21
L22 S20 I35 I35
37 P22
P23 P21 P36 P36
38 A23
A24 Q22 T37 T37
39 P24
P25 P23 P38 P38
40 S25
S26 S24 R39 K39
41 N26
N27 S25 N40 N40
42 I27
I28 I26 L41 L41
43 S28
S29 N27 N42 N42
44 S29
A30 Y28 W43 W43
45 W30
W31 W29 M44 W44
46 W31
W32 W30 W45 W45
47 N32
N33 N31 I46 I46
48 F33
F34 M32 W47 W47
49 G34
G35 G33 G48 G48
BOS CHICK YEAST Rb.s Rb.c
50 S35
S36 S34 V49 I49
51 L36
L37 L35 V50 V50
52 L37
L38 L36 L51 L51
53 G38
A39 G37 A52 A52
54 I39
V40 L38 F53 F53
55 C40
C41 C39 C54 T54
56 L41
L42 L40 L55 L55
57 I42
M43 V41 V56 V56
58 L43
T44 I42 L57 L57
59 Q44
Q45 Q43 Q58 Q58
60 I45
I46 I44 I59 I59
61 L46
L47 V45 V60 V60
62 T47
T48 T46 T61 T61
63 G48
G49 G47 G62 G62
64 L49
L50 I48 I63 I63
65 F50
L51 F49 V64 V64
66 L51
L52 M50 L65 L65
67 A52
A53 A51 A66 A66
68 M53
M54 M52 M67 M67
69 H54
H55 H53 H68 H68
70 Y55
Y56 Y54 Y69 Y69
71 T56
T57 S55 T70 T70
72 S57
A58 S56 P71 P71
73 D58
D59 N57 H72 H72
74 T59
T60 I58 V73 V73
75 T60
S61 E59 D74 D74
76 T61
L62 L60 L75 L75
77 A62
A63 A61 A76 A76
78 F63
F64 F62 F77 F77
79 S64
S65 S63 A78 A78
80 S65
S66 S64 S79 S79
81 V66
V67 V65 V80 V80
82 T67
A68 E66 E81 E81
83 H68
H69 H67 H82 H82
84 I69
T70 I68 I83 I83
85 C70
C71 M69 M84 M84
86 R71
R72 R70 R85 R85
87 D72
N73 D71 N86 D86
88 V73
V74 V72 V87 V87
89 N74
Q75 H73 N88 N88
90 Y75
Y76 N74 G89 G89
91 G76
G77 G75 G90 G90
92 W77
W78 Y76 F91 W91
93 I78
L79 I77 M92 A92
94 I79
I80 L78 L93 M93
95 R80
R81 R79 R94 R94
96 Y81
N82 Y80 Y95 Y95
97 M82
L83 L81 L96 I96
98 H83
H84 H82 H97 H97
99 A84
A85 A83 A98 A98
BOS CHICK YEAST Rb.s Rb.c
100 N85
N86 N84 N99 N99
101 G86
G87 G85 G100 G100
102 A87
A88 A86 A101 A101
103 S88
S89 S87 S102 S102
104 M89
F90 F88 L103 L103
105 F90
F91 F89 F104 F104
106 F91
F92 F90 F105 F105
107 I92
I93 M91 I106 L106
108 C93
C94 V92 A107 A107
109 L94
I95 M93 V108 V108
110 Y95
F96 F94 Y109 Y109
111 M96
L97 M95 L110 I110
112 H97
H98 H96 H111 H111
113 V98
I99 M97 I112 I112
114 G99
G100 A98 F113 F113
115 R100 R101 K99 R114
R114
116 G101 G102 G100 G115 G115
117 L102 L103 L101 L116 L116
118 Y103 Y104 Y102 Y117 Y117
119 Y104 Y105 Y103 Y118 Y118
120 G105 G106 G104 G119 G119
121 S106 S107 S105 S120 S120
122 Y107 Y108 Y106 Y121 Y121
123 T108 L109 R107 K122 K122
124 --
-- S108 A123 A123
125 --
-- P109 P124 P124
126 F109 Y110 R110 R125 R125
127 L110 K111 V111 E126 E126
128 E111 E112 T112 V127 I127
129 T112 T113 L113 T128 T128
130 W113 W114 W114 W129 W129
131 N114 N115 N115 I130 I130
132 I115 T116 V116 V131 V131
133 G116 G117 G117 G132 G132
134 V117 V118 V118 M133 M133
135 I118 I119 I119 L134 V134
136 L119 L120 I120 I135 I135
137 L120 L121 F121 Y136 Y136
138 L121 L122 I122 L137 L137
139 T122 T123 L123 A138 L138
140 V123 L124 T124 M139 M139
141 M124 M125 I125 M140 M140
142 A125 A126 A126 A141 G141
143 T126 T127 T127 T142 T142
144 A127 A128 A128 A143 A143
145 F128 F129 F129 F144 F144
146 M129 V130 L130 M145 M145
147 G130 G131 G131 G146 G146
148 Y131 Y132 Y132 Y147 Y147
149 V132 V133 C133 V148 V148
BOS CHICK YEAST Rb.s Rb.c
150 L133 L134 C134 L149 L149
151 P134 P135 V135 P150 P150
152 W135 W136 Y136 W151 W151
153 G136 G137 G137 G152 G152
154 Q137 Q138 Q138 Q153 Q153
155 M138 M139 M139 M154 M154
156 S139 S140 S140 S155 S155
157 F140 F141 H141 F156 F156
158 W141 W142 W142 W157 W157
159 G142 G143 G143 G158 G158
160 A143 A144 A144 A159 A159
161 T144 T145 T145 T160 T160
162 V145 V146 V146 V161 V161
163 I146 I147 I147 I162 I162
164 T147 T148 T148 T163 T163
165 N148 N149 N149 G164 G164
166 L149 L150 L150 L165 L165
167 L150 F151 F151 F166 F166
168 S151 S152 S152 G167 G167
169 A152 A153 A153 A168 A168
170 I153 I154 I154 I169 I169
171 P154 P155 P155 P170 P170
172 Y155 Y156 F156 G171 G171
173 I156 I157 V157 I172 I172
174 G157 G158 G158 G173 G173
175 T158